Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKEKFDRSKPHVNIGTIGHVDHGKTTLTAAITTVLAKK--------GYADAQAYDQIDGAPEERERGITISTAHVEYQTDS----RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADG-PMPQTREHILLSRQVGVPYIVVFMNKCDMVDDEELLELVEMEIRDLLTEYEFPGDDIPVIKGSALKALQGEADWEAKIDELMEAVDSYIPTPERD-TDKPFMMPVEDVFSITGRGT--------VATGRVERGQVKVGDEVEVIGIEEESKKVVVTGVEMFRKLLDYAEAGDNIGALLRGVAREDIQRGQVLAKPGSITPHTNFKAETYVLTKEEGGRHTPFFNNYRPQFYFRTTDVTGIVTLPEGTEMVMPGDNIELAVELIAPIAIEDGTKFSIREGGRTVGAGVVSNISK |
| 3SJZ Chain:A ((2-250)) | -----WPKVQPEVNIGVVGHVDHGKTTLVQAITGIWTSKHSEETIKLGYAETNI--GVCESCKKPEAYVTEPSCKSCGSDDEPKFLRRISFIDAPGHEVLMATMLSGAALMDGAILVVAANEPFPQPQTREHFVALGIIGVKNLIIVQNKVDVVSKEEALSQYR-QIKQ-FTKGTW-AENVPIIPVSALHKIN--------IDSLIEGIEEYIKTPYRDLSQKPVMLVIRS-FDVNKPGTQFNELKGGVIGGSIIQGLFKVDQEIKVL----------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SJZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84139 for 1649 contacts (-51.0/contact) +
2D Compatibility (PS) -24216 + (NN) -8547 + (LL) 10492
1D Compatibility (HY) -20800 + (ID) 4450
Total energy: -131660.0 ( -79.84 by residue)
QMean score : 0.329
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