Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANKKIRIRLKAYEHRTLDTAAEKIVETATRTGATVAGPVPLPTERSLYTIIRATHKYKDSREQFEMRTHKRLVDIINPTQKTVDALMKLDLPSGVNVEIKL
3R2C Chain:J ((3-81))
--QEKIRIKLRAYDHRLLDQSVKQIIETVKRTGGVVKGPIPLPTRKSEF---------------------SRILDIIRFTPQTIEALMEISLPAGVDVEVKM
General information:
TITO was launched using:
RESULT:
Template:
3R2C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30769 for 530 contacts (-58.1/contact) +
2D Compatibility (PS) -8785 + (NN) -3668 + (LL) 2232
1D Compatibility (HY) -9200 + (ID) 2050
Total energy: -52240.0 ( -98.57 by residue)
QMean score : 0.677
(partial model without unconserved sides chains):
PDB file :
Tito_3R2C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R2C-query.scw
PDB file :
Tito_Scwrl_3R2C.pdb
: