Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKVRLYIARHGKTMFNTIGRAQGWSDTPLTTFGELGIKELGLGLKASNISFKEAFSSDSGRTLQTMEIILREVQQENIPYTRDKRIREWCFGSLDGGYDGDLFNGVLPRVSNGDMSHLTHEEIANLICQVDTAGWAEPWAILSNRILSGFTAIAKKIEDIGGGNAIVVSHGMTIATFLWLIDHSTPRSLGIDNGSVSVVDFEDGTFSIQSIGDMSYREKGREILEKTLQ
1V37 Chain:A ((1-164))
---MELWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALPS-----LPAFSSDLLRARRTAELAG-------FSPRLYPELREIHFGALEGALWETLD-PRYKEALLRFQ--------------GFHPPGGESLSAFQERVFRFLEGLK--------APAVLFTHGGVVRAVLRALGEDG----LVPPGSAVAVDWPRRVLVRLALD-----------------
General information:
TITO was launched using:
RESULT:
Template:
1V37.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75855 for 1351 contacts (-56.1/contact) +
2D Compatibility (PS) -17262 + (NN) -4838 + (LL) 3600
1D Compatibility (HY) -5200 + (ID) 2150
Total energy: -101705.0 ( -75.28 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_1V37.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1V37-query.scw
PDB file :
Tito_Scwrl_1V37.pdb
: