Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGGKFQKNLKKSVVLNRWMNVGLILLFLVGLLITSYPFISNWYYNIKANNQVTNFDNQTQKLNAKEINRRFELAKAYNRTLDPSRLSDPYTEKEKKGIAEYAHMLEITEMIGYIDIPSIKQKLPIYAGTTSSVLEKGAGHLEGTSLPIGGKSSHTVITAHRGLPKAKLFTDLDKLKKGKIFYIHNIKEVLAYKVDQISVVKPDNFSKLLVVKGKDYATLLTCTPYSINSHRLLVRGHRIKYVPPVKEKNYLMKELQTHYKLYFLLSILVILILVALLLYLKRKFKERKRKGNQK |
| 3G66 Chain:A ((4-199)) | --------------------------------------------------VIKEFDETVSQMDKAELEERWRLAQAFNATLKPSEILDPFT-------SEYANMLKVHERIGYVEIPAIDQEIPMYVGTSEDILQKGAGLLEGASLPVGGENTHTVITAHRGLPTAELFSQLDKMKKGDIFYLHVLDQVLAYQVDQIVTVEPNDFEPVLIQHGEDYATLLTCTPYMINSHRLLVRGKRIPYTAPI------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G66.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101851 for 1479 contacts (-68.9/contact) +
2D Compatibility (PS) -20110 + (NN) -7224 + (LL) 9408
1D Compatibility (HY) -22800 + (ID) 5350
Total energy: -147927.0 ( -100.02 by residue)
QMean score : 0.495
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