Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHYQTIIIGAGAAGIGFGSAMQRLG--LTNFLIIEK-GHIGESFLRWPRTTQ-FITPSF---------TT----NGFGFPDLNAV--------IPD-TSPAFSFEKEHLSGVEYARYLQLVAAHYNLPIQNETSVLSIDKRDSLFVIKTSK-------GDFSADYLIMATGEFQNPNTIDIKGAD--------LGMHYGQVDNFHIKSDNPFIIIGGNESACDALTHLVYLGNQVELYTDTFGRKESNPDPSISLSPLTKERLKHIQDHKKEYYSISEGKKAIEIKQIGKQYQVTFDDGSTAESFHKPILSTGFLNTCHLIDGIA----LFEYDKNQLPIVTEDDES--TIVNNCFLIGPSLRQRDTIFCYIYKFRQRFVPVINHIAQREGIILDEDTLEFFKENQMYLDNLACCDVNCDC |
| 2GV8 Chain:A ((5-371)) | -TIRKIAIIGAGPSGLVTAKALLAEKAFD-QVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGG---------------------DIQN--ESLQQV--PEITKFDPT--TREIYLKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHVVPF-----PTSQAQAAFLARVWSGRLKLPSKEEQLKWQDELMFSLSGANNMYHSLDY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133880 for 2519 contacts (-53.1/contact) +
2D Compatibility (PS) -33320 + (NN) -2078 + (LL) 1540
1D Compatibility (HY) -2800 + (ID) 2500
Total energy: -173038.0 ( -68.69 by residue)
QMean score : 0.376
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