Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKPIIAGNWKMN---KTLGEAVSFVEEVKSSIPAADKAEAVVCAPALFLEKLASAVKGTDLKVG--AQNMHFEESGAFTGEISPVALKDLGVDYCVIGHSERREMFAETDETVNKKAHAAFKHGIVPIICVGETLEEREAGKTNDLVADQVKKGLAGLSEEQVAASVIAYEPIWAIGTGKSSTAKDANDVCAHIRKTVAESFSQEAADKLRIQYGGSVKPANIKEYMAESDIDGALVGGASLEPQSFVQLLEEGQYE
1SW7 Chain:A ((4-244))-RKFFVGGNWKMNGDKKSLGELIHTLNGAKLS---AD-TEVVCGAPSIYLD---FARQKLDAKIGVAAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDW--SKVVLAYEPVWAIGTGNSSTPQQAQEVHEKLRGWLKSHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGASLKPE-FVDII------


General information:
TITO was launched using:
RESULT:

Template: 1SW7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1294 46292 35.77 196.15
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : 35.77
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.517

(partial model without unconserved sides chains):
PDB file : Tito_1SW7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SW7-query.scw
PDB file : Tito_Scwrl_1SW7.pdb: