Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPGVQDRVIVVTGAGGGLGREYALTLAGEGASVVVNDLGGARDGTGAGSAMADEVVAEIRDKGGRAVANYDSVATEDGAANIIKTALDEFGAVHGVVSNAGILRDGTFHKMSFENWDAVLKVHLYGGYHVLRAAWPHFREQSYGRVVVATSTSGLFGNFGQTNYGAAKLGLVGLINTLALEGAKYNIHANALAP-IAATRMTQDILPPEVLEKLT----------PEFVAPVVAYLCTEECADNASVYVVGGGKVQRVALFGNDGANFDKPPSVQDVAARWAEITDLSGAKIAGFKL |
3VZP Chain:A ((13-239)) | ----TQRIAYVTGGMGGIGTAICQRLAKDGFRVVA--------GCGPNSPRREKWLEQQKALGFDFIASEGNVADWDSTKTAFDKVKSEVGEVDVLINNAGITRDVVFRKMTRADWDAVIDTNLTSLFNVTKQVIDGMADRGWGRIVNISSVNGQKGQFGQTNYSTAKAGLHGFTMALAQEVATKGVTVNTVSPGYIATDMVKAI-RQDVLDKIVATIPVKRLGLPEEIASICAWLSSEE--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VZP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128201 for 1768 contacts (-72.5/contact) +
2D Compatibility (PS) -23077 + (NN) -8973 + (LL) 3048
1D Compatibility (HY) -10400 + (ID) 3750
Total energy: -171353.0 ( -96.92 by residue)
QMean score : 0.505
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