Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKRPLRWLTEQITLAGMRPPISPQLLINRPAMQPVDLTGKRILLTGASSGIGAAATKQFGLHRA----VVVAVARRKDLLDAVADRITGDGGTAMSLPCDLSDMEAIDALVEDVEKRIGGIDILINNAGRSIRRPLAESLER-WHDVERTMVLNYYAPLRLIRGLAPGMLERGD-GHIINVATWGVLS-EASPLFSVYNASKAALSAVSRIIETEWGSQGVHSTTLYYPLVATPMIAPTKAYDGLPALTAAEAAEWMVTAARTRPVRIAPRVAVAVNALDSIGPRWVNALMQRRNEQLNP |
| 4Z9Y Chain:D ((3-193)) | --------------------------------LNSFDLQGKVALITGCDTGLGQGMA--IGLAQAGCDIVGVNIVEPKDTIE----KVTALGRRFLSLTADMSNVSGHAELVEKAVAEFGHVDILVNNAGIIRREDAIEFSEKNWDDV---MNLNIKSVFFMSQTVARQFIKQGKGGKIINIAS--MLSFQGGIRVPSYTASKSAVMGVTRLMANEWAKHGINVNAIAPGYMAT------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Z9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116755 for 1425 contacts (-81.9/contact) +
2D Compatibility (PS) -19708 + (NN) -6605 + (LL) 8472
1D Compatibility (HY) -13600 + (ID) 3150
Total energy: -151346.0 ( -106.21 by residue)
QMean score : 0.559
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