Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSVMSHEFQLATAETWPNPWPMYRALRDHDPVHHVVPPQRPEYDYYVLSRHADVWSAARDHQTFSSAQGLTVNYGELEMIGLHDTP-----PMVMQDPPVHTEFRKLVSRGFTPRQVETVEPTVRKFVVERLEKLRANGG-GDIVTELFKPLPSMVVAHYLGVPEEDWTQFDGWTQAIVAANAVDGATTGALDAVGSMMAYFTGLIERRRTEPADDAISHLVAAGVGADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDPEGIPDAVEELLRLTSPVQGL--ARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVA--ESRIVWSGGSYVRRPLSVPFRVTS |
| 4Z5P Chain:B ((24-398)) | ---------------------PKFAELRETDPLARVRLPYGGEG--WMVTRYDDVRAANSDPR-FSRAQ-----------IG-EDTPRTTPDTILSLDPPEHTRLRRLLSKAFTARRMGAMQSWLEELFAGLLDGVERTGHPADIVRDLAQPFTIAVICRLLGVPYEDRGRFQHWSEVIMSTTAY--SKEEAVSADASIRAYLADLVSARRAAPHDDLLGVLVSAR--DDDDRLTEDELITFGVTLLVAGHETSAHQLGNMVYALLTHEDQLSLLREQPELLPRAVEELLRFVPLGNGVGNARIALEDVELSGGTVRAGEGVVAAAVNANRDPRAFD-DPDRLDITREKNPHLAFGHGAHYCLGAQLARMELRVAIGGLLERFPGLRLAVPADQVEWKTGGLFRGPQRLPI---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Z5P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192576 for 2874 contacts (-67.0/contact) +
2D Compatibility (PS) -38769 + (NN) -20950 + (LL) 2500
1D Compatibility (HY) -26000 + (ID) 6650
Total energy: -282445.0 ( -98.28 by residue)
QMean score : 0.463
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