Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIPAFHPGELNVYSAPGDVADVSRALRLTGRRVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGEDLDAYPRTPDDDLAQLRAEGVEIAFTPTTAAMYPDGLRTTVQ---PGPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREADGLAMSSRNRYLDPAQRAAAVALSAALTAAAHAATAGAQAALDAARAVLDA---APGVAVDYLELRDIGLGPMPLNGSGR--LLVAARLGTTRLLDNIAIEIGTFAGTDRPDGYRAILESHWRN |
| 1IHO Chain:B ((15-282)) | ------------------------RRLRMEGKRVALVPTMGNLHDGHMKLVDEAK-ARADVVVVSIFVNPMQFDRPEDLARYPRTLQEDCEKLNKRKVDLVFAPSVKEIYPNGTETHTYVDVPG-LSTMLEGASRPGHFRGVSTIVSKLFNLVQPDIACFGEKDFQQLALIRKMVADMGFDIEIVGVPIMRAKDGLALSSRNGYLTAEQRKIAPGLYKVLSSIADKLQAG-ERDLDEIITIAGQELNEKGFRADDIQIRDADTLLEVSETSKRAVILVAAWLGDARLIDNKMVEL---------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1IHO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -166194 for 1963 contacts (-84.7/contact) +
2D Compatibility (PS) -29063 + (NN) -19894 + (LL) 1756
1D Compatibility (HY) -22000 + (ID) 6150
Total energy: -241545.0 ( -123.05 by residue)
QMean score : 0.699
|
|
|