Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKLHTNHGVITLKLDEEKAPETAANFKEYVKSGHYDNTVFHRVINNFMIQGGGFEPGMKQ---KP-----TRAPIKNEANNGLTNK-VGSIAMARTMDPHSASAQFFINVADNDFLNHTAPTTQGWGYAVFGEVVEGMDVVNKIKGVATTMRSGHQDVPAEDVIIEKAEIVEE
3BO7 Chain:A ((8-173))
YLRIVTTQGSLNIELHADMAPRACDSFLRLCAVKYFDDTIFHRCIRNFMIQGGRAELRQP-QSPRSISGFPGGAPFEDEFDNRLVHQGIGVLSMA-NDGKHSNLSEFFITFKSCEHLNNKH--------TIFGRVVGGLDVLRQWEKLETDKK----DKPLKPPKVEEIIVFKN
General information:
TITO was launched using:
RESULT:
Template:
3BO7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61233 for 1157 contacts (-52.9/contact) +
2D Compatibility (PS) -15825 + (NN) -3642 + (LL) 172
1D Compatibility (HY) -12000 + (ID) 2300
Total energy: -94828.0 ( -81.96 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_3BO7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BO7-query.scw
PDB file :
Tito_Scwrl_3BO7.pdb
: