Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGFLTGKRALIVGVASKLSIASGIAAAMHREGAELAFTYQNDKLRGRVEEFASGWGSRPELCFPCDVADDSQIEAVFAALGKHWDGLDIIVHSVGFAPGDQLDGDFTAVTTREGFRIAHDISAYSFIALAKAGREMMKGRNGSLLTLSYLGAERTMPNYNVMGMAKASLEAGVRYLAGSLGAEGTRVNAVSAGPIRTLAASGIKSFRKMLAANERQTPLRRNVTIEEVGNAGAFLCSDLASGISGEILYVDGGFNTTAMGPLDDD
4M87 Chain:B ((2-257))-GFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDS--ELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPI-----------GKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYSINALS-----


General information:
TITO was launched using:
RESULT:

Template: 4M87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -173890 for 2094 contacts (-83.0/contact) +
2D Compatibility (PS) -27081 + (NN) -14233 + (LL) 668
1D Compatibility (HY) -25600 + (ID) 7650
Total energy: -247786.0 ( -118.33 by residue)
QMean score : 0.564

(partial model without unconserved sides chains):
PDB file : Tito_4M87.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M87-query.scw
PDB file : Tito_Scwrl_4M87.pdb: