Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAWKGEVLANNEAGQVTSIIYNPGDVITIVAAGWASYGPTQKWGPQGDREHPDQGLICHDAFCGALVMKIGNSGTIPVNTGLFRWVAPNNVQGAITLIYNDVPGTYGNNSGSFSVNIGKDQS
2WYF Chain:B ((1-121))
-AWKGEVLANNEAGQVTSIIYNPGDVITIVAAGWASYGPTQKWGPQGDREHPDQGLICHDAFCGALVMKIGNSGTIPVNTGLFRWVA--NVQGAITLIYNDVPGTYGNNSGSFSVNIGKDQS
General information:
TITO was launched using:
RESULT:
Template:
2WYF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61262 for 938 contacts (-65.3/contact) +
2D Compatibility (PS) -13119 + (NN) -11426 + (LL) -12
1D Compatibility (HY) -15600 + (ID) 5950
Total energy: -107369.0 ( -114.47 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_2WYF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WYF-query.scw
PDB file :
Tito_Scwrl_2WYF.pdb
: