Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEVKHSRLIILGSGPAGYTAAVYAARANLKPVVITGIQPGGQLTTTTEVDNWPGDVEGLTGPALMTRMQQHAERFDTEIV-YDHIHTAELQQRPFTLKGDSGTYTCDALIIATGASAQYLGMSSEEAFMGKGVSACATCDGFFYRNQVVCVVGGGNTAVEEALYLANIAKEVHLIHRRDKLRSEKILQDKLFDKAENGNVHLHWNTTLDEVLGDASGVTGVRLKSTIDGSTSELSLAGVFIAIGHKPNTDLFQG-QLEMR-DGYLRIHGGSEGNATQTSIEGVFAAGDVADHVYRQAITSAGAGCMAALDAEKYLDDH |
| 3CTY Chain:A ((14-315)) | ---ERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAEAPLVENYLGFK-SIVGSELAKLFADHAANY-AKIREGVEVRSIKKTQGGFDIETNDDTYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMCENAYV-QEIKKR---NIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDERGYIVVDSR-----QRTSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLYSDS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CTY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214468 for 2677 contacts (-80.1/contact) +
2D Compatibility (PS) -32609 + (NN) -10645 + (LL) -52
1D Compatibility (HY) -19200 + (ID) 4500
Total energy: -281474.0 ( -105.15 by residue)
QMean score : 0.450
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