Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQRILIVGAGFAGMWSALSAVRQLDRQGRDDVEVAVLAPQPELRI-RPRFYEPDVQR-MAAP-LGELFAAVGVRFVQG-SAQRIDVAGKRVEYRDAEGTLAQLDYDRLVLAAGSGVWRPASVAGID-AAFDVDQLEDALRLEAHLHALRDLPDSPARNTVVVAGGGFTGIETATEMPARLRAILGEKAALRVIVVDRGAAIGAS-MGADLSGLIAEASAELGVEWCLGRSVAAVDAEGVTLDDGQRIEAKTVVWTVGVRAST-LTGQIPGERDAQGRLHVDRNLKVLGLDDVYATGDVARAATDDLGN-HALMTCQHAIALGRSAGNNVAADLLGVEPIPYSQVKYVTCLDLGGWGAVFTEGWDRQVRFVREEGKKIKTEINGVWIYPPAADRAVALAAADPLIPVVA |
| 2GQW Chain:A ((6-308)) | LKAPVVVLGAGLASVSFVAELRQAGY-----QGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQSFDPQAHTVALSD----GRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLR---------PQSRLLIVGGGVIGLELAATARTAG---------VHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSVDGVVLLDDGTRIAADMVVVGIGVLANDALARAAGLAC--DDGIFVDAYGRT-TCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDP---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208741 for 2439 contacts (-85.6/contact) +
2D Compatibility (PS) -31148 + (NN) -3490 + (LL) 6960
1D Compatibility (HY) -13200 + (ID) 3900
Total energy: -253519.0 ( -103.94 by residue)
QMean score : 0.432
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