Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHRSPLAWLRLLLAAVLGAFLLGGPLHAAETAATRSPAWAQAVDPSINLYR-MSPTLYRSALPNAQSVALLQRLQVKTVVSF----IKDDDRAWLGQAPVRVLSLPTHADRVDDAEVLSVL----RQLQAAEREGPVLMHCKHGNNRTGLFAAMYRIVVQGWDKQAALEEMQHGGFGDEDDMRDAS-AYVRGADVDGLRLAMANGECSPSRFAVCHVREWMAQALDRP
1XRI Chain:A ((1-151))
-----------------------------------------HLIPPLN-FSMVDNGIFRSGFPDSANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGIRLFQFGIEGNKEPFVNIPDHKIRMALKVLLDEKNHPVLIHCKRGKHRTGCLVGCLRKL-QKWCLTSIFDEYQRFAAAKARVSDQRFMEIFDVSS----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1XRI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35247 for 1055 contacts (-33.4/contact) +
2D Compatibility (PS) -15612 + (NN) -10735 + (LL) 6460
1D Compatibility (HY) -12400 + (ID) 1300
Total energy: -68834.0 ( -65.25 by residue)
QMean score : 0.440
(partial model without unconserved sides chains):
PDB file :
Tito_1XRI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XRI-query.scw
PDB file :
Tito_Scwrl_1XRI.pdb
: