Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METVLTARDLTRHYEVSRGLFKGHAQVRALNGVSFELEAGKTLAVVGESGCGKSTLARALTLIEEPTSGSLKIAGQEVKGASKDQRRQLRRDVQMVFQNPYASLNPRQKIGDQLAEPLLINTALSREERREKVQQ---MMRQVGLRPEHYQRYPH----MFSGGQRQRIALARAMMLQPKVLVADEPTSALDVS----IQAQVLNLFMDLQQQFRTAYVFISHNLAVVRHVADDVLVMYLGRPAEMGPADKLYENPLHPYTRALLSATPAIHPDPTKPKIRIQGELPNPLNPPEGCAFHKRCPYATERCRSEVPELRLLDQRQVACHHAEQFLG |
3NHA Chain:A ((70-270)) | -----------------------------LQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDI---SQVTQASLRSHIGVVPQDTVL-------FNDTIADNIRYGRVTAGNDEVEAAAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCAN-----RTTIV-VAHRLSTVVN-ADQILVIKDGCIVERG--------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3NHA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -82324 for 1404 contacts (-58.6/contact) +
2D Compatibility (PS) -20663 + (NN) -9414 + (LL) 8200
1D Compatibility (HY) -11600 + (ID) 3400
Total energy: -119201.0 ( -84.90 by residue)
QMean score : 0.487
|
|
|