Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVLIVHAHNEPQSFTRALCDQACETLAGQGHAVQVSDLYAMNWNPVASAADFAER-ADPDYLVYALEQRESVKRQSLAADIQAELDKLLWADLLILNFPIYWFSVPAILKGWFDRVLVSGVCYGGKRFYDQGGLAGKKALVSLTLGGRQHMFGEGAIHGPLEDMLRPILRGTLAYVGMQVLEPFVAWHVPYISEEARGNFLRAYRARLENLEQDVPLRFPRLEQFDALLQPLAR
4FGK Chain:B ((7-223))
-KVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNFEPRATDKDITGTLSNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVIFQFPLYWFSVPAILKGWMDRVLCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPLQHGTLHFCGFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWKEEPI-----------------
General information:
TITO was launched using:
RESULT:
Template:
4FGK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -169504 for 1682 contacts (-100.8/contact) +
2D Compatibility (PS) -23058 + (NN) -7444 + (LL) 1752
1D Compatibility (HY) -22000 + (ID) 4700
Total energy: -224954.0 ( -133.74 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_4FGK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FGK-query.scw
PDB file :
Tito_Scwrl_4FGK.pdb
: