Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------MSMRLKLLRKKLGVTLETLAEKTGLTKSYLSKVERGLNTP-SIAAALKLAKALNVQVEELFSEESDGVDGYSIVRRDQRKSLSSGDDGPAYASLAQQIGARALLPFIVHPPRDFSHSTFKEHLGEEFIFVHEGQVEVDF---MNQRIILERGDALHFNAQKPHRIRSLGETQAELLVVIHSDE
1ZZC Chain:A ((5-198))
KTASTGFAELLKDRREQVKMDHAALASLLGETPETVAAWENGEGGELTLTQLGRIAHVLGTSIGALTPPAGNDLDDGVIIQMPYYVYNCLVRTKRA--------PSLVPLVVDVLTDNPDDAKFNSGHAGNEFLFVLEGEIHMKWGDKNPKEALLPTGASMFVEEHVPHAFTAAKGTGSAKLIAVNF--
General information:
TITO was launched using:
RESULT:
Template:
1ZZC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53823 for 1108 contacts (-48.6/contact) +
2D Compatibility (PS) -18413 + (NN) -11881 + (LL) 1000
1D Compatibility (HY) -4400 + (ID) 1550
Total energy: -89067.0 ( -80.39 by residue)
QMean score : 0.428
(partial model without unconserved sides chains):
PDB file :
Tito_1ZZC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZZC-query.scw
PDB file :
Tito_Scwrl_1ZZC.pdb
: