Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGLGPGVGDSEGGPRPLFCRKGALRQKVVHEVKSHKFTARFFKQPTFCSHCTDFIWGIGKQGLQCQVCSFVVHRRCHEFVTFECPGAGKGPQTDDPRNKHKFRLHSYSSPTFCDHCGSLLYGLVHQGMKCSCCEMNVHRRCVRSVPSLCGVDHTERRGRLQLEIRAPTADEIHVTVGEARNLIPMDPNGLSDPYVKLKLIPDPRNLTKQKTRTVKATLNPVWNETFVFNLKPGDVERRLSVEVWDWDRTSRNDFMGAMSFGVSELLKAPVDGWYKLLNQEEGEYYNVPVADADNCSLLQKFEACNYPLELYERVRMGPSSSPIPSPSPSPTDPKRCFFGASPGRLHISDFSFLMVLGKGSFGKVMLAERRGS-DELYAIKILKKDVIVQDDDVDCTLVEKRVLALGGRGPGGRPHFLTQLHSTFQTPD-RLYFVMEYVTGGDLMYHIQQL-GKFKEPHAAFYAAEIAIGLFFLHNQ-GIIYRDLKLDNVMLD-AEGHIKITDFGMCKENVFPGTTTR--TFCGTPDYIAPEIIA---YQPYGKSVDWWSFGVLLYEMLAG-QPPFDGEDEEELFQAIMEQTVTYP-KSLSREAVAICKGFLTKHPGKRLGSGPDGEPTIRAHGFFRWID---WERLERLEIPPPFRPRPCGRSGENFDKFFTRAAPALTPPDRLVLASIDQADFQGFTYVNPDFVHPDARSPTSPVPVPVM |
| 1CDK Chain:A ((8-350)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGSEQESVKEFLAKAKEDFLKKWENPAQNTA------H--LDQ------------------------------------------------------------------------------------------FERIKTLGT----------------------------------------G--SFGRVMLVKHKETG-NHFAMKILDKQKVVKLKQIEHTLNEKRILQAV---NFPFLVKLEYSFKDN----SNLYMVMEYVPGGEMFSHLRR-IGRFSEPHARFYAAQIVLTFEYLHS-LDLIYRDLKPENLLIDQ-QGYIQVTDFGFAKRV-K--G--RTWTLCGTPEYLAPEIILSKGY---NKAVDWWALGVLIYEMAAGY-PPFFADQPIQIYEKIVSGKVRFPS-HFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFA---TTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSI------NEKCGKEFSEF------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136813 for 2634 contacts (-51.9/contact) +
2D Compatibility (PS) -35554 + (NN) -19739 + (LL) 16788
1D Compatibility (HY) -25200 + (ID) 5550
Total energy: -206068.0 ( -78.23 by residue)
QMean score : 0.444
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