Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSNSQGQSPPVPFPAPAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKKIEDASNPLLLKRRKKARALEAAALAH |
3HZT Chain:A ((12-287)) | ---------------------------------------------------------------------LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAV-LKQLDHPNIMKLYEFFED----KRNYYLVMEVYRGGELFDEIILR--QKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG--------TAYYIAPEVL-RKKYDEKCDVWSCGVILYILLCGYPPF----GGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKFCSQ----VG---------------KHALTGALGNMK------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HZT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155490 for 2030 contacts (-76.6/contact) +
2D Compatibility (PS) -27059 + (NN) -12554 + (LL) 5852
1D Compatibility (HY) -25600 + (ID) 5350
Total energy: -220201.0 ( -108.47 by residue)
QMean score : 0.585
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