Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEPSGSPVHVQLPQQAAPVTAAAAAAPAAATAAPAPAAPAAPAPAPAPAAQAVGWPICRDAYELQEVIGSGATAVVQAALCKPRQERVAIKRINLEKCQTSMDELLKEIQAMSQCSHPNVVTYYTSFVVKDELWLVMKLLSGGSMLDIIKYIVNRGEHKNGVLE--EAIIATILKEVLEGLDYLHRNGQIHRDLKAGNILLGE-DGSVQIADFGVSAFLATGGDVTRNKVRKTFVGTPCWMAPEVMEQV-RGYDFKADMWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPTLETGVEDKEMMKKYGKSFRKLLSLCLQKDPSKRPTAAELLKCKFFQKAKNREYLIEKLLTRTPDIAQRAKKVRRVPGSSGHLHKTEDGDWEWSDDEMDEKSEEGKAAFSQEKSRRVKEENPEIAVSASTIPEQIQSLSVHDSQGPPNANEDYREASSCAVNLVLRLRNSRKELNDIRFEFTPGRDTADGVSQELFSAGLVDGHDVVIVAANLQKIVDDPKALKTLTFKLASGCDGSEIPDEVKLIGFAQLSVS |
| 4BIE Chain:B ((26-282)) | -------------------------------------------------------------------VLGKGTYGIVYAGRDLSNQVRIAIKEIP-ER-------LHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLR-------SKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-------------FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG----MFKVHPEIPESMSAEAKAF---ILKCFEPDPDKRACANDLLVDEFLKVS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BIE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149305 for 1908 contacts (-78.3/contact) +
2D Compatibility (PS) -25854 + (NN) -13003 + (LL) 17668
1D Compatibility (HY) -16400 + (ID) 4500
Total energy: -191394.0 ( -100.31 by residue)
QMean score : 0.475
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