Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKSLTESLNSVFNKLKGKSIISEDDFNLAIREIRIALIEADVSLEVAKKFINDIKDKVIGEKV-IKSVSPAQMIIKVVQDNLITILGLEKSDLNLGANPPAVIMMVGLQGAGKTTTSGKLALKLKKQKK-KVMLASLDIYRPAAQKQLEVLGKQIDIQTLSTVTDE-KPTAITKRALAAAKNDNYDVLILDTAGRLHIDDNMMNELKTVKKIASPAEVILVADAMIGQDAVNIAKSFNETIGVTGIILTRVDGDARGGAALSMKMVTNCPIKFIACGEKLSDLDDFYPDRIAKRILDMGDVISLVERAAEIVGQEE-FDKLQKKVKKGRLDLNDLVRMLKTLKKMDGISNIMKFIPSSFTKKLSSGV-PDDSKVKKYIAIINSMTEKERQDPNILNGKRRLRIAKGSGTRVPDVNLLIKQYDQMSAMVNKFSKVDHSKFKESDLMDMLSRK |
| 3DM5 Chain:A ((2-435)) | VLDNLGKALANTLKKIARASSVDEALIKELVRDIQRALIQADVNVRLVLQLTREIQRRAL-EEKPPAGISKKEHIIKIVYEELTKFLGTEAKPIEIK-EKPTILLMVGIQGSGKTTTVAKLARYFQK-RGYKVGVVCSDTWRPGAYHQLRQLLDRYHIEVFGNPQ-EKDAIKLAKEGVDYFKSKGVDIIIVDTAGRHKEDKALIEEMKQISNVIHPHEVILVIDGTIGQQAYNQALAFKEATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGEKIDDIEPFDPPRFVSRLLGLGDIQGLLEKFKELEKEVEIKEEDIERFLRGKFTLKDMYAQLEAMRKMGP-------------------ISIGEERLKKFKVIMDSMTEEELLNPEIINYSRIKRIARGSGTSTKDVKELLDQYRQMKKLFKSMNKRQLS-------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3DM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -201558 for 3266 contacts (-61.7/contact) +
2D Compatibility (PS) -44525 + (NN) -29237 + (LL) 2076
1D Compatibility (HY) -28000 + (ID) 7150
Total energy: -308394.0 ( -94.43 by residue)
QMean score : 0.574
|
|
|