Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLNEIQILNNGYPMPSVGLGVYKISDEDMTKVVNAAIDAGYRAFDTAYFYDNEASLGRA----LKDNGVDREDLFITTKLWNDYQGYEKTFEYFNKSIENLQTDYLDLFLIHWPC------------------EADGLFLETYKAMEELYEQGKVKAIGVCNFNVHHLEKLMAQSSIK--PMVNQIEVHPYFNQQELQEFCDRHDIKVTAWMPL---------MRNRGLLDNPVIVKIAEKYHKTPAQVVLRWHLAHNRIIIPKSQTPKRIQENIDILDFNLELTEVAEIDALDRNARQGKNPDDVKIGDLK |
| 3LEP Chain:A ((6-297)) | ------LLNNGAKMPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPCGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAKHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWR-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LEP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153527 for 2142 contacts (-71.7/contact) +
2D Compatibility (PS) -28160 + (NN) -12494 + (LL) 824
1D Compatibility (HY) -24800 + (ID) 5800
Total energy: -223957.0 ( -104.56 by residue)
QMean score : 0.520
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