Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRNDLETLKHIIDSSNRITFFTGAGVSVASGVPDFRSMGGLFDEISKDGLS-PEYLLSRDYLEDDPEGFINFCHKRLLFVDTKPNIVHDWIAKLERNQQSLGVITQNIDGLHSDAGSQHVD--ELHGTLNRFYC--NACHK----SYTKSDVIDRTLKHCDNCGGAIRPDIVLYGEMLDQPTIIRALNKIEHADTLVVLGSSLVVQPAAGLISHFK-GDNLIIINKDRTPYDSDATLVIHDDMVSVVKSLMTE |
4L3O Chain:A ((20-236)) | ------------ERCRRVICLVGAGISTSAGIPDFRS----YDNLEKYHLPYPEAIFEISYFKKHPEPFFALA-KELYPGQFKPTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLEQEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSEVTPKCEDCQSLVKPDIVFFGESLPARFFSCMQSDFLKVDLLLVMGTSLQVQPFASLISKAPLSTPRLLINKEKA------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72404 for 1527 contacts (-47.4/contact) +
2D Compatibility (PS) -21452 + (NN) -3923 + (LL) 3024
1D Compatibility (HY) -15600 + (ID) 3500
Total energy: -113855.0 ( -74.56 by residue)
QMean score : 0.367
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