Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEFYASLKSIAMHVPSERVKNAEFQQF-LDTSDEWIEKRTGIKERRFANDEEK---SSDLGVIAAKQAIERAHLTPQDIDLVVVATLSPDFLAMPSTACVLSAKLGIENKPAFDISAACTGFIYLLSVAKAYVESGMYENVLIVGAEKTSSVLDFKDRGTCILFGDGAGACVIGRTK-RLKESVLDVQISANGNFSNYLYTPRTLKPTPFNAKEEALEPFLRMKGNEVFKLAVKTLLKDVETILEKNALKPEDVRLFIPHQANFRIIQAVREHLDFKDEQVV-LTVHKYGNTSAASIPMAMCEAY--EEGRLKKGDLMLLDAFGGGLTWGSALVYFGGI |
| 1HNJ Chain:A ((1-317)) | --MYTKIIGTGSYLPEQVRTNADLEKMV-DTSDEWIVTRTGIRERHIAAP---NETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHA-FPSAACQIQSMLGIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDGAGAAVLAAS-E--EPGIISTHLHADGSYGELLTLPN---ADRVNPE-N--SIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDN-VVVTLDRHGNTSAASVPCALDEAVRD--GRIKPGQLVLLEAFGGGFTWGSALVRF--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1HNJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -236605 for 2915 contacts (-81.2/contact) +
2D Compatibility (PS) -32559 + (NN) -12083 + (LL) 2220
1D Compatibility (HY) -25600 + (ID) 6900
Total energy: -311527.0 ( -106.87 by residue)
QMean score : 0.515
|
|
|