Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFLDHEKRRQLLNERHSCKMFDSHYEFSSTELEEIAEIARLSPSSYNTQPWHFVMVTNKDLKKQIAAHSY----FNEEMIKSASALMVVCSLKPSELLPTSHYMQNLYPE--SYKVRVIPSFA-------QMLGVRFNHSMQKLESYILEQCYIAVGQICMGVSLMGLDSCIIGGFDPLKVGEILEERINKPKIVCLIALGKRVAEA----SKKSRKSKVDAITWL
1ICR Chain:A ((2-217))
-------DIISVALKRHSTKAFDASKKLTPEQAEQIKTLLQYSPSSTNSQPWHFIVASTEEGKARVAKSAAGNYVFNERKMLDASHVVVFCAKTAMDDV----WLKLVVDQEDADGRFATPEAKAANDKGRKFFADMHRKDLHDDAEWMAKQVYLNVGNFLLGVAALGLDAVPIEGFDAAILDAEFGLKEKGYTSLVVVPVGHHSVEDFNATLPKSRLPQNITLTEV
General information:
TITO was launched using:
RESULT:
Template:
1ICR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105810 for 1431 contacts (-73.9/contact) +
2D Compatibility (PS) -21189 + (NN) -4959 + (LL) 580
1D Compatibility (HY) -8000 + (ID) 2350
Total energy: -141728.0 ( -99.04 by residue)
QMean score : 0.428
(partial model without unconserved sides chains):
PDB file :
Tito_1ICR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ICR-query.scw
PDB file :
Tito_Scwrl_1ICR.pdb
: