Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKIGNVEIKNQVVVAPMAGISNSAFRLTVKEFGAGLVCCEMISDKGIAY-R--N------------------AK-TLDMLYI----DEKEKPLSLQIFGGEKETLVEAAKFVAENTTA-DIIDINMGCPVNKIIKCEAGAKWLLDPNKVYDMVAAVVDAVDKPVTVKMRIGWDEEHVFAIENALAAERAGAAAVAMHGRTR-------------------VQMYEG----SANWDVLRDVKREL--KIPFMANGDVRTPEDAKRILEHTGADGVMIGRAALG-NPWMIYRTVKFLETGELLLEPEPREKMQTAMLHLNRLVELKGENIAVREFRQHAAYYLKGARGSTRAKVAANQATKQSEMEAILNEFVLQYEEKALAKQD |
| 1JUB Chain:A ((4-290)) | -TTFANAKFANPFMNASGVHCMTIEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVLKNQKENAQEGPIFFSIAGMSAAENIAMLKKIQE-SDFSGITELNLSCPNVPGE-----PQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYFDL--VHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLL-CGATMLQIGTALHKEGPAIFDRIIKELE--------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1JUB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -149184 for 1976 contacts (-75.5/contact) +
2D Compatibility (PS) -24830 + (NN) -6783 + (LL) 8412
1D Compatibility (HY) -5600 + (ID) 2350
Total energy: -180335.0 ( -91.26 by residue)
QMean score : 0.414
|
|
|