Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLGKVITAMVTPIHPEKDKVCKKRIHHLVNHLIKNGSDGLVIAGTTGESPTLSHDEKIKLFRQVIETNDGRAKLIAGTGSNNTAETIAFTKEVATLGGMDAVLIVAPYYNKPNQDGLYAHFAAVAEASDLPVVIYNIPGRSVVNIEPETIIRLAKLPNIVGVKESSGNLDNISKIIAET-SDDFQVYSGDDSLTLPILAVGGNGVISVASHIVGNEMQEMIQAFERGEVQKAAQIHRELLP---LMNGLFSVPNPAPTKYLLNQQGISVGPVRLPLVDLNAEQGTKLQAILEGLSK |
3DI1 Chain:B ((11-274)) | --------ALTTPFTNNKVNIEALKTH--VNFLLENNAQAIIVNGTTAESPTLTTDEKERILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGA-DAIMLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIVALKDATNDFEYLEEVKKRIDTNSFALYSGNDDNVVEYYQRGGQGVISVIANVIPKEFQALYDAQQSG-----LDIQDQFKPIGTLLSALSVDINPIPIKALTSYLGFGNYELRLPLVSL----------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3DI1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -93767 for 2217 contacts (-42.3/contact) +
2D Compatibility (PS) -29318 + (NN) -21617 + (LL) 2896
1D Compatibility (HY) -20400 + (ID) 5000
Total energy: -167206.0 ( -75.42 by residue)
QMean score : 0.472
|
|
|