Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKRKVGIIGTGHVGSDVAFSLVTQGICDEIVLIDKIETKAESEALELRDMASMTNSYTMITSNDWSALGDADVIVMAVGPETLLREDRMEELVETSRSVAEIVPKIIASGFQGIFVNITNPCDVITMLIQKLSGFDHSRVFGTGTSLDTARMRRVVGEALHINPKSVEGYVLGEHGESQFVAWSTVKIGGVSIKDYKTTTSLD-LPA-----LKDAVRGGGWNILTGKGWTSFGIATAVAGIVDAILTDAKQVFP----LAVFSEKTSTYIGQPALIGANGVIDILEPPLTETEKINFNESAEIIKNAFQLI |
| 1LTH Chain:R ((9-311)) | ---KLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVDIATHVAQKLTGLPENQIFGSGTNLDSARLRFLIAQQTGVNVKNVHAYIAGEHGDSEVPLWESATIGGVPMSDWTPLPGHDPLDADKREEIHQEVKNAAYKIINGKGATNYAIGMSGVDIIEAVLHDTNRILPVSSMLKDFHGISDICMSVPTLLNRQGVNNTINTPVSDKELAALKRSAETLK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LTH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212779 for 2552 contacts (-83.4/contact) +
2D Compatibility (PS) -31109 + (NN) -6049 + (LL) 1036
1D Compatibility (HY) -19600 + (ID) 4750
Total energy: -273251.0 ( -107.07 by residue)
QMean score : 0.541
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