Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITIKNIQKSFGENK--VLKGIDLTVKKGEVVTILGPSGSGKTTFLRCLNLLERPENGEISMHDQIINCKKPSKKEVLQLRKNTAMVFQQYNLFSHKTVIQNVM---EGLTVARKI-PKKIA--HEIAERELTKVGLADKLSAYPSQLSGGQKQRVGIARALAINPDVILFDEPTAALDPELVGEVLEVMLEIARAGATMIVVTHEMEFAKRVADQVVFMDGGLIVEQGTPDEVFNHTKEERTKRFLHRVSADYLYEIKEVKKERVI |
2FGK Chain:C ((8-247)) | -ITFRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPN-----WLRRQVGVVLQD-NVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDFIS-ELRE-GYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDQATSALDYESEHVIMRNMHKICK-GRTVIIIAHRLSTVKN-ADRIIVMEKGKIVEQGKHKELL--SEPESLYSYLYQLQSD-------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2FGK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -100942 for 1771 contacts (-57.0/contact) +
2D Compatibility (PS) -23789 + (NN) -2264 + (LL) 3248
1D Compatibility (HY) -22000 + (ID) 4050
Total energy: -149797.0 ( -84.58 by residue)
QMean score : 0.393
|
|
|