Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLSFSDTYRLNNGIEMPRHGFGVYKLTDEARMRTALETAVDVGYRLFDTASFYHNEKELG----DFFASSGLKRDEFFVTTKMWNTEQGYDETLRAFEKSQKKLQLDQIDLYLVHWPK-------------------QDT-FFDTWRAVEKLYDEGLVRAIGVSNFEAHHLDRL--RTSANVLPVVDQLETHPHFPNHLLHRYLEELHIVHQAWSPLGRG----------GVLQEQILIDLAEKHGKSPAQIVLRWHLQNNISIIPKSETPSRIRENAAIYDFELSEADMRQVERLNTGERVSHAPDVMYVRSEI |
| 3LD5 Chain:A ((7-299)) | ----------LNNGAKMPILGLGTWK-SPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPSGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAKHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVC------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LD5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -95996 for 2151 contacts (-44.6/contact) +
2D Compatibility (PS) -28099 + (NN) -14026 + (LL) 1892
1D Compatibility (HY) -24800 + (ID) 5300
Total energy: -166329.0 ( -77.33 by residue)
QMean score : 0.480
|
|
|