Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPFVKIDLFEGRSQEQKNELAREVTEVVSRIAKAPKENIHVFINDMPEGTYYPQGELKKK---
1BJP Chain:A ((1-62))
-PIAQIHILEGRSDEQKETLIREVSEAISRSLDAPLTSVRVIITEMAKGHFGIGGELASKVRR
General information:
TITO was launched using:
RESULT:
Template:
1BJP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7876 for 319 contacts (-24.7/contact) +
2D Compatibility (PS) -6665 + (NN) -6022 + (LL) 208
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -25655.0 ( -80.42 by residue)
QMean score : 0.679
(partial model without unconserved sides chains):
PDB file :
Tito_1BJP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BJP-query.scw
PDB file :
Tito_Scwrl_1BJP.pdb
: