Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIIYLGLACVSILTLSGCESIERSLKGDRYVDQKLAENSSKEATEQLNKKTKQALKADKKAFPQLDKAVAKNEAQVLIKTSKGDINIKLFPKYAPLAVENFLT-----------HAKEGYYNGLSFHRVIKDFMIQSGD-PNGDGTGGKSIWNSKDKKKDSGNGFVNEISPYLYNIRGSLAMANAGADTNGSQFFINQSQQDHSKQLSDKKVPKVIIKAYSEGGNPSLDGGYTVFGQVISGMETVDKIASVEVTKSDQPKEKITITSIKVIKDYKFK |
| 1C5F Chain:M ((21-170)) | ------------------------------------------------------------------------------------GRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTGGESIYGG---MFDDEEFVMKHDEPFV------VSMANKGPNTNGSQFFITTTPA------------------------PHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRPLADVVILNCGELV----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1C5F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38866 for 1014 contacts (-38.3/contact) +
2D Compatibility (PS) -14891 + (NN) -8213 + (LL) 8320
1D Compatibility (HY) -11600 + (ID) 2950
Total energy: -68200.0 ( -67.26 by residue)
QMean score : 0.474
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