Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAQHTIDQTQVIHTKPSALSYKEKTLVMGILNVTPDSFSDGGKYDSLDKALLHAKEMIDDGAHIIDIGGESTRPGAECVSEDEEMSRVIPVIERITKELGVPISVDTYKASVADEAVKAGASIINDIWGAKHDPKMASVAAEHNVPIVLMHNRPERN------YNDLLPDMLSDLMESVKIAVEAGVDEKNIILDPGIGF---AKTYHDNLAVMNKLEIFSGLGYPVLLATSRKRFIGRVLDLPPEERAEGTGATVCLGIQKGCDIVRVHDVKQIARMAKMMDAMLNKGGVHHG |
3TR9 Chain:A ((12-291)) | --------SFHLRLRDDKRIVFSEPAVMGIINVSPNSFYHPH--LDLNSALRTAEKMVDEGADILDIGGEATNPFV-SPSTQIELDRLLPVIDAIKKRFPQLISVDTSRPRVMREAVNTGADMINDQRALQLD-DALTTVSALKTPVCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISEDRIIIDPGFGQGNYGKNVSENFYLLNKLPEFVAMGLPVLSGWSRKSMIGDVLNQPPENRLFGSIAADVLAVYHGASIIRTHDVKATREAIKIATYTRS------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TR9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136430 for 2288 contacts (-59.6/contact) +
2D Compatibility (PS) -29566 + (NN) -21640 + (LL) 764
1D Compatibility (HY) -13200 + (ID) 4900
Total energy: -204972.0 ( -89.59 by residue)
QMean score : 0.524
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