Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNQNQLISVEDIVFRYRKDAERRALDGVSLQVYEGEWLAIVGHNGSGKSTLARALNGLILPESGDIEVAGIQLTEESVWEVRKKIGMVFQNPDNQFVGTTVRDDVAFGLENNGVPREEMIERVDWAVKQVNMQDFLD-----------QEPHHLSGGQKQRVAIAGVIAARPDIIILDEATSMLDPIGREEVLETVRHLKEQGMATVISITHDLNEAAKADRIIVMNGGKKYAEGPPEEIFKLNKELVRIGLDLPFSFQLSQLLRENGLALEENHLTQEGLVKELWTLQSKM |
1XEF Chain:D ((2-225)) | ------ITFRNIRFRYKPDSPV-ILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQ--DNVLLNRSIIDNIS--LANPGMS----VEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALD-YESEHVIMRNMHKICKGR-TVIIIAARLSTVKNADRIIVMEKGKIVEQGKHKELL--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XEF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92559 for 1659 contacts (-55.8/contact) +
2D Compatibility (PS) -23096 + (NN) -6276 + (LL) 5124
1D Compatibility (HY) -18800 + (ID) 4100
Total energy: -139707.0 ( -84.21 by residue)
QMean score : 0.417
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