Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENVFDYEDIQLIPAKCIVNSRSECDTSVRLGGH-TFKLPVVPANMQTIIDEKLAISLAENGYFYVMHR-FEPETRID-FIKDMNARGLFSSISVGVKDEEYEFVRQLAEENLTPEYVTIDIAHGHSNAVIEMIQHLKKHLPDSFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASK---PIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESPGQTIEKDGKLYKEYFGSAS-------EFQKGEKKN--VEGKKMHVAHKGSIKDTLIEMEQDLQSSISYAGGTKLNAI-RNVDYVIVKNSIFNGDKY
4IXH Chain:C ((13-340))----LTFEDILLVPNYSEVLPR-EVSLETKLTKNVSLKIPLISSAMDTVTEHLMAVGMARLGGIGIIHKNMDMESQVNEVLKVKNSGGLRVGAAIGVN--EIERAKLLVEAGV--DVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVIVGNVVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGV--PQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEKELIGDTVYKYYRGMGSVGAMKSG---------MVPEGIEGRVKYKGEMEGVVYQLVGGLRSCMGYLGSASIEELWKKSSYVEITTS-------


General information:
TITO was launched using:
RESULT:

Template: 4IXH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1827 -18225 -9.98 -61.16
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain C : 0.77

3D Compatibility (PKB) : -9.98
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.564

(partial model without unconserved sides chains):
PDB file : Tito_4IXH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IXH-query.scw
PDB file : Tito_Scwrl_4IXH.pdb: