Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MSTIDISAGTIHYEATGP-ETGRPVVFVHGY-MMGGQLWRRVSERLAGRGLRCIAPTWP---LGAHPKPLRPGADQTIGGVAGIVADVLAALELKDVVLVGNDTGGVVT-QLVAVHYPERLGALVL-----------------TSCDAFEHFPPPILKPVILAAKSATLFRAAIQVMRAPAARN-------RAYAGLSHHNIDHLTRAWVRPALSNPAIAEDLRQLSLSLRTEVTTAVAARLPEFDK----PALIAWSADDVFFALEN-GQRLAATIPRARFEVIEGARTFSMVDSPDRLADQLSTVAVRT |
| 1A88 Chain:A ((1-275)) | GTVTTSD----GTNIFYKDWGPR-DGLPVVFHHGWPLSADD-WDNQMLFFLSHGYRVIAHDRRGHGRSDQPST-----GHDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFR-------AALAA------NRAQFYIDVPSGPFYGFNRE--GATVSQGLIDHWWLQGMM-GAANAHYECIAAFSE-------TDF-TDDLK----RIDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136600 for 1863 contacts (-73.3/contact) +
2D Compatibility (PS) -25242 + (NN) -5927 + (LL) 2828
1D Compatibility (HY) -7200 + (ID) 2950
Total energy: -175091.0 ( -93.98 by residue)
QMean score : 0.420
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