Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRPLARLRGRRVVPQRSAGELDAMAAAGAVVAAALRAIRAAAAPGTSSLSLDEIAESVIRESGATPSFLGYHGYPASICASINDRVVHGIPSTAEVLAPGDLVSIDCGAVLDGWHGDAAITFGVGALSDADEALSEATRESLQAGIAAMVVGNRLTDVAHAIETGTRAAELRYGRSFGIVAGYGGHGIGRQMHMDPFLPNEGAPGRGPLLAAGSVLAIEPMLTLGTTKTVVLDDKWTVTTADGSRAAHWEHTVAVTDDGPRILTLG
4FLI Chain:A ((43-293))
------LKGTSQIKLLSSEDIEGMRLVCRLAREVLDVAAGMIKPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRP-LQEGDIVNVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYECLMQAIDAVKPGVRYRELGNIIQKHAQA------NGFSVVRSYCGHGIHKLFHTAPNVPHYAKNKAVGVMKSGHVFTIEPMICEGGWQDETWPDGWTAVTRDGKRSAQFEHTLLVTDTGCEILT--
General information:
TITO was launched using:
RESULT:
Template:
4FLI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122903 for 2213 contacts (-55.5/contact) +
2D Compatibility (PS) -27723 + (NN) -13516 + (LL) 1228
1D Compatibility (HY) -15200 + (ID) 4000
Total energy: -182114.0 ( -82.29 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_4FLI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FLI-query.scw
PDB file :
Tito_Scwrl_4FLI.pdb
: