Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRL-------------AADGHKVAVTHRGSGAPKGLFGVECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMGMGH
4BNW Chain:B ((31-268))
------------------LVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGA--GLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRD---------EWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVV-----AGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGGMYM--
General information:
TITO was launched using:
RESULT:
Template:
4BNW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108989 for 1666 contacts (-65.4/contact) +
2D Compatibility (PS) -22798 + (NN) -6804 + (LL) 2468
1D Compatibility (HY) -17600 + (ID) 4650
Total energy: -158373.0 ( -95.06 by residue)
QMean score : 0.574
(partial model without unconserved sides chains):
PDB file :
Tito_4BNW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BNW-query.scw
PDB file :
Tito_Scwrl_4BNW.pdb
: