Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLNTAIATRVNGTPPPEVPIADIELGSLDFWALDDDVRDGAFATLRREAPISFWPTIELP-GFVAGNGHWALTKYDDVFYASRHPDIFSSYPNITINDQTPEL-AEYFGSMIVLDDPRHQRLRSIVSRAFTPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDMMGIPKADHQRIFHWTNVILGFGDPDLATDFDEFMQVSADIGAYATALAEDRRVNHHDDLTSSLVE-AEVDGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDGLAPTAVEEIVRWASPVVYMR-RTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARNPNPHLGFGGGGAHFCLGANLARREIRVAFDELRRQMPDV---VATEEPARLLSQFIHGIKTLPVTWS |
| 3A4H Chain:A ((25-397)) | -----------------------------------------AYAALRAEDPVR---KLALPDGPV-----WLLTRYADVREAFVDPRLSKDWRHTLPEDQRADMPATPTPMMILMDPPDHTRLRKLVGRSFTVRRMNELEPRITEIADGLLAGLPTDGP---VDLMREYAFQIPVQVICELLGVPAEDRDDFSAWSSVLV---DDSPADDKNAAM---GKLHGYLSDLLERKRTEPDDALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQR-KLLAEDPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDASGGV-FFGHGIHFCLGAQLARLEGRVAIGRLFADRPELALAVGLDELVYRESTLVRGLSRMPVT-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A4H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174921 for 2951 contacts (-59.3/contact) +
2D Compatibility (PS) -38742 + (NN) -15869 + (LL) 1644
1D Compatibility (HY) -26000 + (ID) 6700
Total energy: -260588.0 ( -88.30 by residue)
QMean score : 0.463
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