Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQDVVDEILAAGGQAVADGSDISDWDQAANLIQAAVETYGGVDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAASHWRGLSKAGKAPKDIDARIINTSSGAGLQGSVGQGNYSAAKAGIAALTLVGAAEMRRYGVTVNAIAPA-ARTRMTETVFAEMMAK--PQEGFDAMAPENVSPLVVWLGS-AESRDVTGKVFEVEGGIIRVAEGWAHGPQVDKGVKWDPAELGPVVSDLLAKSRPPVPVYGA |
| 4DMM Chain:B ((29-267)) | ------RIALVTGASRGIGRAIALELAAAGAKVAVN---------YASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIM---------LKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTS------LLEVIPLGRYGEAA--EVAGVVRFLAADPAAAYITGQVINIDGGLV------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DMM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97763 for 2038 contacts (-48.0/contact) +
2D Compatibility (PS) -25108 + (NN) -8879 + (LL) 2924
1D Compatibility (HY) -16000 + (ID) 4900
Total energy: -149726.0 ( -73.47 by residue)
QMean score : 0.502
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