Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLSVAPKEIAGHGLLDGKVVVVTAAAGTGIGSATARRALAEGADVVISDHHERRLGETAAELSALGLGRVEHVVCDVTSTAQVDALIDSTTARMGRLDVLVNNAGLGGQTPVADMTDDEWDRVLDVSLTSVFRATRAALRYFRDAPHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAAEYGVRINAVSPSIAR---HKFLDKTASAELLDRLAAGEAFGRAAEPWEVAATIAFLASDYSSYLTGEVISVSCQHP
3TZC Chain:D ((10-245))
---------------LEGKVALVTGAS-RGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG----MALNVTNPESIEAVLKAITDEFGGVDILVNNA--------------EWSDIMETNLTSIFRLSKAVLRGMMKKRQ-GRIINVGSVV--------ANFAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTK--NDEQRTATLAQVPA----GRLGDPREIASAVAFLASPEAAYITGETLHVN----
General information:
TITO was launched using:
RESULT:
Template:
3TZC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131152 for 1740 contacts (-75.4/contact) +
2D Compatibility (PS) -23084 + (NN) -5115 + (LL) 2100
1D Compatibility (HY) -12800 + (ID) 3950
Total energy: -174001.0 ( -100.00 by residue)
QMean score : 0.636
(partial model without unconserved sides chains):
PDB file :
Tito_3TZC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TZC-query.scw
PDB file :
Tito_Scwrl_3TZC.pdb
: