Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKLHTNHGVITLKLDEEKAPETAANFKEYVKSGHYDNTVFHRVINNFMIQGGGFEPGMKQKPT--RAPIKNEANNGLTNK-VGSIAMARTMDPHSASAQFFINVADNDFLNHTAPTTQGWGYAVFGEVVEG-MDVVNKIKGVATTMRSGHQDVPAEDVIIEKAEIVEE
2HQ6 Chain:A ((26-181))
KVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMA-NAGSHDNGSQFFFTLGRADELNNKH--------TIFGKVTGDTVYNMLRLSEVDIDDD----ERPHNPHKIKSCEVLFN
General information:
TITO was launched using:
RESULT:
Template:
2HQ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53857 for 1207 contacts (-44.6/contact) +
2D Compatibility (PS) -15861 + (NN) -1760 + (LL) 52
1D Compatibility (HY) -8800 + (ID) 2200
Total energy: -82426.0 ( -68.29 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_2HQ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HQ6-query.scw
PDB file :
Tito_Scwrl_2HQ6.pdb
: