Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFVSVEQLDKSYGATSIFRDIDFAAARGEFVTLLGPSGCGKSTLLRCIAGLTEVDSGRILIDGEDVVPLPPQKRG----------------IAMVFQSYALFPNMTVQQNVAFG-LRMQKVPAAELKQRVAEAIELVELGEYA-ARYPHQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLREQIRRIQQ--ELGLTTVFVTHDQEEALTLSDRIVLMNAGRIVQSGDAETLYTAPENAFAAGFIGNYNLLDAEQASRLLGQSCAQQVAIRPESLRLGNEPSEGVPALVRSHSLLGNVIRYRVEAAGVELTVDVLNRSADRLYPAGSQLTLVIDRNSIREVA |
| 1B0U Chain:A ((12-253)) | --------LHKRYGGHEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAIIVNGQN-INLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKHDARERALKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPEL---VGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGDPEQVFGNPQSPRLQQFL------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145856 for 1705 contacts (-85.5/contact) +
2D Compatibility (PS) -24090 + (NN) -8523 + (LL) 7940
1D Compatibility (HY) -19200 + (ID) 4050
Total energy: -193779.0 ( -113.65 by residue)
QMean score : 0.568
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