Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVILLGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERITEADCAK-GFLFDGFPRTIPQAEALKDAGVTIDHVVEIAVDDEEIVSRIAGRRVHPASGRVYHTEHNPPKVAGKDDVTGEELIQREDDKEETVRHRLSVYHSQTKPLVDFYQKLSAAEGTPKYHSIAGVGSVEQITAKVLSALS
1ZAK Chain:A ((6-187))
LKVMISGAPASGKGTQCELIKTKYQLAHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPDEIVVNMVKERLRQPDAQENGWLLDGYPRSYSQAMALETLEIRPDTFILLDVPDELLVERVVGRRLDPVTGKIYHLKYSPP----ENEEIASRLTQRFDDTEEKVKLRLETYYQNIESLLSTYENI------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ZAK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66387 for 1295 contacts (-51.3/contact) +
2D Compatibility (PS) -19882 + (NN) -12012 + (LL) 2184
1D Compatibility (HY) -15200 + (ID) 3550
Total energy: -114847.0 ( -88.68 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_1ZAK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZAK-query.scw
PDB file :
Tito_Scwrl_1ZAK.pdb
: