Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIAAYQARCQARVDAALDALFVAPR-EELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGA-PQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNPQEHAVCLEMLTR--LARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALELRDLALAALDGFP-PSADPLRQLARYIVERRN
3NPK Chain:A ((5-281))--------LKELFIHHLEKNL-PKVESFHPFFNEALALMLKAGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLVLSHAHLK---DEIKIKLIKTLAFNAGL--NGMVIGQAIDCFFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELN-NEESNQIYKLGLKLGLIFQINDDIIDVT------------------NSFVNLLGLEQAIKTKENLLNECEQDLEKLNEKLAQMIQNLIIQ------


General information:
TITO was launched using:
RESULT:

Template: 3NPK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94539 for 2069 contacts (-45.7/contact) +
2D Compatibility (PS) -28802 + (NN) -24213 + (LL) 2448
1D Compatibility (HY) -18800 + (ID) 4100
Total energy: -168006.0 ( -81.20 by residue)
QMean score : 0.426

(partial model without unconserved sides chains):
PDB file : Tito_3NPK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NPK-query.scw
PDB file : Tito_Scwrl_3NPK.pdb: