Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIAAYQARCQARVDAALDALFVAPR-EELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGA-PQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNPQEHAVCLEMLTR--LARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALELRDLALAALDGFP-PSADPLRQLARYIVERRN |
3NPK Chain:A ((5-281)) | --------LKELFIHHLEKNL-PKVESFHPFFNEALALMLKAGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLVLSHAHLK---DEIKIKLIKTLAFNAGL--NGMVIGQAIDCFFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELN-NEESNQIYKLGLKLGLIFQINDDIIDVT------------------NSFVNLLGLEQAIKTKENLLNECEQDLEKLNEKLAQMIQNLIIQ------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NPK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94539 for 2069 contacts (-45.7/contact) +
2D Compatibility (PS) -28802 + (NN) -24213 + (LL) 2448
1D Compatibility (HY) -18800 + (ID) 4100
Total energy: -168006.0 ( -81.20 by residue)
QMean score : 0.426
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