Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METVLTARDLTRHYEVSRGLFKGHAQVRALNGVSFELEAGKTLAVVGESGCGKSTLARALTLIEEPTSGSLKIAGQEVKGASKDQRRQLRRDVQMVFQNPYASLNPRQKIGDQLAEPLLINTALSREERREKVQQ---MMRQVGLRPEHYQRYPH----MFSGGQRQRIALARAMMLQPKVLVADEPTSALDVS----IQAQVLNLFMDLQQQFRTAYVFISHNLAVVRHVADDVLVMYLGRPAEMGPADKLYENPLHPYTRALLSATPAIHPDPTKPKIRIQGELPNPLNPPEGCAFHKRCPYATERCRSEVPELRLLDQRQVACHHAEQFLG |
| 3NH9 Chain:A ((70-270)) | -----------------------------LQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDI---SQVTQASLRSHIGVVPQDTVL-------FNDTIADNIRYGRVTAGNDEVEAAAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCAN-----RTTIV-VAHRLSTVVN-ADQILVIKDGCIVERG--------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3NH9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -82496 for 1414 contacts (-58.3/contact) +
2D Compatibility (PS) -20511 + (NN) -7435 + (LL) 8200
1D Compatibility (HY) -11600 + (ID) 3400
Total energy: -117242.0 ( -82.92 by residue)
QMean score : 0.428
|
|
|