Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | M-SLEIVILAAGQGTRMRSA-LPKVLHPIAGKPMLGHVIDCARQLQPERIHVVIGHGADLVRERMAADDL--NFVLQAEQLGTGHAVAQALPFLS-ADQVLILYGDVPLIQLDTLQRLLAQVTPDQ--LSLLTVDMLDPTGYGRIVRDDQGAVQAIVEHKDATPAQRQIGEINTGILAVPGKRLADWLGRLSNDNAQGEYYLTDVIAMAVGDGLVVASAQPLDAMEVQGVNDRMQQAQLERHYQRLRAEELMRQGVTLLDPQRLDVRGEISVGRDVLIDVNVVLEGRVVIEDDVRIGPNCVIRDSVLRRGAVIKANSHLEGAELGEGSDAGPFARLRPGSVLGARAHVGNFVELKNARLGEGSKAGHLSYLGDAELGANCNIGAGTITCNYDGANKFRTELGDDVFIGSNNSLVAPLKIGDGATTAAGSTITHEVPAKNLAFGRARQKNLENWKRPEKIKK |
| 1HV9 Chain:A ((4-251)) | -NAMSVVILAAGKGTRMYS-DLPKVLHTLAGKAMVQHVIDAANELGAAHVHLVYGHGGDLLKQALKDD--NLNWVLQAEQLGTGHAMQQAAPFFADDEDILMLYGDVPLISVETLQRLRDAKP--QGGIGLLTVKLDDPTGYGRITRE-NGKVTGIVEHKDATDEQRQIQEINTGILIANGADMKRWLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQRLSEVEGVNNRLQLSRLERVYQSEQAEKLLLAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HV9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196292 for 1962 contacts (-100.0/contact) +
2D Compatibility (PS) -26455 + (NN) -10874 + (LL) 10472
1D Compatibility (HY) -24400 + (ID) 6800
Total energy: -254349.0 ( -129.64 by residue)
QMean score : 0.538
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