Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVNMSFNCGIVGLPNIGKSTLFNALTQSSAAEAANYPFCTIEPNIGKVPIRDQRLRQIAAIAGSEKVIYNQLEVVDIAGLVKGASKGEGLGNKFLSHIREVDAIVHLLRCFMDDGVNHVHNEIDPISDAEVVEMELILADIDSIEKRLPQLEKKAKQGNKELKRQLDLMHEVLATLKLGKPARSLECSDRNEMKSLQLLTAKPVMYVCNVEDINIITGNKLSQKVKKIAEENKNKFYCISAKLESDIANLESEEEKQSFLSEFGLQESGLDGVARIMYEVLSMITFFTVGLKEARAWPIKIGSTADKAAGVIHNDFEKGFIKAETISFADYVKYRSESACKDAGKIRFEGKDYIVQDGDIMHFRFNV |
3I8S Chain:B ((1-261)) | --MKKLTIGLIGNPNSGKTTLFNQLT-GSRQRVGNWAGVTVERKEGQFSTTDH-----------------QVTLVDLPGTYSLTTISSQ------TSLDEQIACHYILS----GDADLLINVVDASNLERNLYLTLQLLELGI---------------------------PCIVALNMLDIAEK-----QNIRIEIDALSARLGCPVIPLVSTRGRGIEALKLAIDRYKANENVELVHYAQPLLNEADSLAKVMPSDI-------------PLKQRRWLGLQMLEGDIYSRAYAGEASQHLDAALARLRNEMDD--PALHIADARYQCIAAICDVVSN----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I8S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53770 for 2106 contacts (-25.5/contact) +
2D Compatibility (PS) -27718 + (NN) -5498 + (LL) 7844
1D Compatibility (HY) -9200 + (ID) 2100
Total energy: -90442.0 ( -42.94 by residue)
QMean score : 0.250
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